Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AC008677.1-201ENST00000519230 1561 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH19Q8TAB3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PCDH19Q8TAB3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH19Q8TAB3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDH19Q8TAB3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH19Q8TAB3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 YBX1P5-201ENST00000509441 847 ntBASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH19Q8TAB3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 HTR5BP-201ENST00000430851 1154 ntBASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 AC243562.1-201ENST00000560672 389 ntBASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms