Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 AC092580.3-201ENST00000430932 139 ntBASIC17.5■□□□□ 0.39
BEST2Q8NFU1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 HLA-V-204ENST00000476601 1289 ntBASIC17.5■□□□□ 0.39
BEST2Q8NFU1 AC027369.6-201ENST00000525520 931 ntBASIC17.5■□□□□ 0.39
BEST2Q8NFU1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SPDYE12P-201ENST00000618416 771 ntBASIC17.5■□□□□ 0.39
BEST2Q8NFU1 AL390754.1-201ENST00000619088 582 ntBASIC17.5■□□□□ 0.39
BEST2Q8NFU1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AL139010.1-201ENST00000454878 894 ntBASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AL138828.2-201ENST00000615812 383 ntBASIC17.49■□□□□ 0.39
BEST2Q8NFU1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST2Q8NFU1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 PCDHA14-201ENST00000506751 2298 ntBASIC17.48■□□□□ 0.39
BEST2Q8NFU1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 AL133215.2-201ENST00000609242 977 ntBASIC17.48■□□□□ 0.39
BEST2Q8NFU1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST2Q8NFU1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms