Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPOQ8N3V7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SYNPOQ8N3V7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 TTTY23B-201ENST00000442790 549 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AL139010.1-201ENST00000454878 894 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 RN7SL837P-201ENST00000463010 287 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SPDYE18-201ENST00000510091 1050 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AC093726.1-201ENST00000608064 963 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AC060834.1-201ENST00000443027 2032 ntBASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SYNPOQ8N3V7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AC106886.4-201ENST00000623557 2502 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AL118508.1-201ENST00000613502 2345 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 MIR658-201ENST00000385210 100 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AC022210.1-201ENST00000449856 793 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AC123567.1-201ENST00000548294 1261 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 AC092337.1-201ENST00000568699 1129 ntBASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.5■□□□□ 0.23
SYNPOQ8N3V7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms