Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SCML4Q8N228 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SCML4Q8N228 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SCML4Q8N228 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.87■□□□□ 0.29
SCML4Q8N228 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.87■□□□□ 0.29
SCML4Q8N228 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.87■□□□□ 0.29
SCML4Q8N228 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.87■□□□□ 0.29
SCML4Q8N228 RPL37AP1-201ENST00000412502 279 ntBASIC16.87■□□□□ 0.29
SCML4Q8N228 MTND6P24-201ENST00000440466 518 ntBASIC16.87■□□□□ 0.29
SCML4Q8N228 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.87■□□□□ 0.29
SCML4Q8N228 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.87■□□□□ 0.29
SCML4Q8N228 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 TEX28P1-201ENST00000613479 1221 ntBASIC16.87■□□□□ 0.29
SCML4Q8N228 TEX28P2-201ENST00000617764 1221 ntBASIC16.87■□□□□ 0.29
SCML4Q8N228 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.87■□□□□ 0.29
SCML4Q8N228 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCML4Q8N228 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SCML4Q8N228 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SCML4Q8N228 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 ZNF890P-202ENST00000530367 1156 ntBASIC16.86■□□□□ 0.29
SCML4Q8N228 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.86■□□□□ 0.29
SCML4Q8N228 AC005498.2-205ENST00000593218 784 ntBASIC16.86■□□□□ 0.29
SCML4Q8N228 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.86■□□□□ 0.29
SCML4Q8N228 AL590560.3-201ENST00000623350 461 ntBASIC16.86■□□□□ 0.29
SCML4Q8N228 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SCML4Q8N228 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SCML4Q8N228 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
SCML4Q8N228 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCML4Q8N228 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SCML4Q8N228 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.85■□□□□ 0.29
SCML4Q8N228 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SCML4Q8N228 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.85■□□□□ 0.29
SCML4Q8N228 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.85■□□□□ 0.29
SCML4Q8N228 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.85■□□□□ 0.29
SCML4Q8N228 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SCML4Q8N228 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.85■□□□□ 0.29
SCML4Q8N228 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SCML4Q8N228 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SCML4Q8N228 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.85■□□□□ 0.29
SCML4Q8N228 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.85■□□□□ 0.29
SCML4Q8N228 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.85■□□□□ 0.29
SCML4Q8N228 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCML4Q8N228 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.85■□□□□ 0.29
SCML4Q8N228 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms