Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCN4BQ8IWT1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 BANF1P1-201ENST00000553684 263 ntBASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 AC061975.2-201ENST00000581722 295 ntBASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 AC100757.3-201ENST00000622361 1406 ntBASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SCN4BQ8IWT1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 UGT1A2P-201ENST00000454886 866 ntBASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 AL590560.3-201ENST00000623350 461 ntBASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.17■□□□□ 0.34
SCN4BQ8IWT1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 TSPY16P-201ENST00000449843 468 ntBASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 POU5F1P6-201ENST00000466990 990 ntBASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 HLA-V-204ENST00000476601 1289 ntBASIC17.16■□□□□ 0.34
SCN4BQ8IWT1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms