Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL035456.1-201ENST00000456064 1369 ntBASIC17.3■□□□□ 0.36
RNF135Q8IUD6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 AL512343.1-201ENST00000605837 169 ntBASIC17.3■□□□□ 0.36
RNF135Q8IUD6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF135Q8IUD6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 CETN4P-206ENST00000642099 2168 ntBASIC17.29■□□□□ 0.36
RNF135Q8IUD6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 AC105233.2-201ENST00000523697 349 ntBASIC17.29■□□□□ 0.36
RNF135Q8IUD6 AF228730.5-201ENST00000530288 346 ntBASIC17.29■□□□□ 0.36
RNF135Q8IUD6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 MIR3909-201ENST00000579518 119 ntBASIC17.29■□□□□ 0.36
RNF135Q8IUD6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF135Q8IUD6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 RPL37AP1-201ENST00000412502 279 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AL589739.1-201ENST00000607720 493 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AC099568.2-201ENST00000609194 695 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms