Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FAM58DP-201ENST00000428076 619 ntBASIC15.66■□□□□ 0.1
RAB43Q86YS6 BCRP1-201ENST00000444246 691 ntBASIC15.66■□□□□ 0.1
RAB43Q86YS6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 AC069262.1-201ENST00000539058 672 ntBASIC15.66■□□□□ 0.1
RAB43Q86YS6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 SLC22A20-204ENST00000530038 1673 ntBASIC15.66■□□□□ 0.1
RAB43Q86YS6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 TUBB3P1-201ENST00000405796 1332 ntBASIC15.66■□□□□ 0.1
RAB43Q86YS6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB43Q86YS6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB43Q86YS6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 AC093214.1-201ENST00000511688 1107 ntBASIC15.65■□□□□ 0.1
RAB43Q86YS6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 AC005498.2-205ENST00000593218 784 ntBASIC15.65■□□□□ 0.1
RAB43Q86YS6 AC021097.1-201ENST00000607902 574 ntBASIC15.65■□□□□ 0.1
RAB43Q86YS6 AC008267.7-201ENST00000624570 1194 ntBASIC15.65■□□□□ 0.1
RAB43Q86YS6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB43Q86YS6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB43Q86YS6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
RAB43Q86YS6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 AC116353.5-201ENST00000638148 1699 ntBASIC15.64■□□□□ 0.09
RAB43Q86YS6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 KLF2P3-201ENST00000451977 1087 ntBASIC15.64■□□□□ 0.09
RAB43Q86YS6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB43Q86YS6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 AC125807.1-201ENST00000483097 614 ntBASIC15.64■□□□□ 0.09
RAB43Q86YS6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB43Q86YS6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms