Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TUBB7P-202ENST00000428444 1305 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AC002056.1-201ENST00000395613 760 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 ACTG1P14-201ENST00000446382 1122 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AC107918.2-201ENST00000530817 355 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AC091167.2-201ENST00000579581 588 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 FRMD8P1-201ENST00000440433 1524 ntBASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.15■□□□□ 0.02
CHMP1BQ7LBR1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 AC079328.2-201ENST00000561241 3354 ntBASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 AC004967.1-201ENST00000453589 447 ntBASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 AC124947.2-201ENST00000547118 1133 ntBASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SNHG9-202ENST00000564014 471 ntBASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 KRT8P49-201ENST00000604166 1432 ntBASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP1BQ7LBR1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms