Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 RPSAP43-201ENST00000402237 625 ntBASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 AC093724.1-201ENST00000448659 1027 ntBASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 TIMM8BP1-201ENST00000452384 211 ntBASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 AL391005.1-201ENST00000623953 2435 ntBASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNE3Q6ZMZ3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 IGHV3-62-201ENST00000520057 340 ntBASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 MIR4469-201ENST00000583919 79 ntBASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 AC008267.7-201ENST00000624570 1194 ntBASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNE3Q6ZMZ3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AL513523.2-202ENST00000427283 2040 ntBASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 ADH5P3-201ENST00000433842 1137 ntBASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AC027307.2-201ENST00000591252 911 ntBASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNE3Q6ZMZ3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms