Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.72■□□□□ 0.27
CASC4Q6P4E1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.72■□□□□ 0.27
CASC4Q6P4E1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.72■□□□□ 0.27
CASC4Q6P4E1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 FAM185BP-201ENST00000443595 716 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AC108751.1-201ENST00000490852 363 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AL603832.2-201ENST00000566195 2125 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 MIR4515-201ENST00000584082 81 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 ACTL9-202ENST00000612068 1252 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AL773604.1-201ENST00000617417 272 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 AL691432.3-201ENST00000621860 400 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 PRAL-201ENST00000624952 3286 ntBASIC16.71■□□□□ 0.27
CASC4Q6P4E1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.71■□□□□ 0.27
CASC4Q6P4E1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CASC4Q6P4E1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.7■□□□□ 0.26
CASC4Q6P4E1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.7■□□□□ 0.26
CASC4Q6P4E1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms