Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 BNIP3P1-202ENST00000550043 1585 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC092506.1-202ENST00000401022 528 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 BOLA2P3-201ENST00000404566 256 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC012441.1-201ENST00000446669 685 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 BX284668.4-201ENST00000453917 508 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 RHOXF1P1-202ENST00000635473 501 ntBASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
VPS13DQ5THJ4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
VPS13DQ5THJ4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
VPS13DQ5THJ4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.72□□□□□ -0.69
VPS13DQ5THJ4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms