Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 AL589987.1-201ENST00000453380 819 ntBASIC19.38■□□□□ 0.69
PDS5AQ29RF7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 AC006449.6-201ENST00000612330 2296 ntBASIC19.38■□□□□ 0.69
PDS5AQ29RF7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 CU639417.3-201ENST00000624240 1404 ntBASIC19.37■□□□□ 0.69
PDS5AQ29RF7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC023310.3-201ENST00000557027 670 ntBASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC100756.1-201ENST00000562736 682 ntBASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC138749.3-201ENST00000567691 622 ntBASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 AC116165.1-201ENST00000611806 668 ntBASIC19.37■□□□□ 0.69
PDS5AQ29RF7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDS5AQ29RF7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 MIR648-201ENST00000385046 94 ntBASIC19.36■□□□□ 0.69
PDS5AQ29RF7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 TPRX2P-201ENST00000535362 881 ntBASIC19.36■□□□□ 0.69
PDS5AQ29RF7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDS5AQ29RF7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms