Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.18□□□□□ -0.14
UBA52P62987 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 AC023274.1-201ENST00000418278 595 ntBASIC14.18□□□□□ -0.14
UBA52P62987 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.18□□□□□ -0.14
UBA52P62987 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 AC124947.2-201ENST00000547118 1133 ntBASIC14.18□□□□□ -0.14
UBA52P62987 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 AC027796.2-201ENST00000575326 344 ntBASIC14.18□□□□□ -0.14
UBA52P62987 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.18□□□□□ -0.14
UBA52P62987 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
UBA52P62987 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.17□□□□□ -0.14
UBA52P62987 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.17□□□□□ -0.14
UBA52P62987 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.17□□□□□ -0.14
UBA52P62987 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.17□□□□□ -0.14
UBA52P62987 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.17□□□□□ -0.14
UBA52P62987 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.17□□□□□ -0.14
UBA52P62987 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
UBA52P62987 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.17□□□□□ -0.14
UBA52P62987 AC064836.3-201ENST00000607928 673 ntBASIC14.17□□□□□ -0.14
UBA52P62987 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.17□□□□□ -0.14
UBA52P62987 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 AC093525.9-201ENST00000624961 1746 ntBASIC14.17□□□□□ -0.14
UBA52P62987 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
UBA52P62987 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.17□□□□□ -0.14
UBA52P62987 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
UBA52P62987 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBA52P62987 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
UBA52P62987 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
UBA52P62987 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms