Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.39■□□□□ 0.21
AP1S1P61966 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.39■□□□□ 0.21
AP1S1P61966 MIR4453-201ENST00000584019 89 ntBASIC16.39■□□□□ 0.21
AP1S1P61966 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP1S1P61966 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 TUBB3P1-201ENST00000405796 1332 ntBASIC16.39■□□□□ 0.21
AP1S1P61966 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AP1S1P61966 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
AP1S1P61966 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 MIR648-201ENST00000385046 94 ntBASIC16.38■□□□□ 0.21
AP1S1P61966 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 KLF2P3-201ENST00000451977 1087 ntBASIC16.38■□□□□ 0.21
AP1S1P61966 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 AC125807.1-201ENST00000483097 614 ntBASIC16.38■□□□□ 0.21
AP1S1P61966 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 AC051619.7-201ENST00000568314 623 ntBASIC16.38■□□□□ 0.21
AP1S1P61966 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.38■□□□□ 0.21
AP1S1P61966 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S1P61966 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S1P61966 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S1P61966 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
AP1S1P61966 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.37■□□□□ 0.21
AP1S1P61966 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 AL139010.1-201ENST00000454878 894 ntBASIC16.37■□□□□ 0.21
AP1S1P61966 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.37■□□□□ 0.21
AP1S1P61966 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.37■□□□□ 0.21
AP1S1P61966 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.37■□□□□ 0.21
AP1S1P61966 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 AC105021.1-202ENST00000570572 669 ntBASIC16.37■□□□□ 0.21
AP1S1P61966 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms