Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN6P56747 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CLDN6P56747 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN6P56747 AC084346.2-201ENST00000607097 949 ntBASIC15.62■□□□□ 0.09
CLDN6P56747 AC133552.6-201ENST00000613406 534 ntBASIC15.62■□□□□ 0.09
CLDN6P56747 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN6P56747 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN6P56747 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 KRT8P12-202ENST00000472924 1397 ntBASIC15.62■□□□□ 0.09
CLDN6P56747 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN6P56747 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
CLDN6P56747 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN6P56747 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN6P56747 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN6P56747 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN6P56747 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.61■□□□□ 0.09
CLDN6P56747 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.61■□□□□ 0.09
CLDN6P56747 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CLDN6P56747 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLDN6P56747 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN6P56747 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDN6P56747 KRT8P39-201ENST00000396270 1433 ntBASIC15.6■□□□□ 0.09
CLDN6P56747 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 AC093724.1-201ENST00000448659 1027 ntBASIC15.6■□□□□ 0.09
CLDN6P56747 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN6P56747 SDHAP3-202ENST00000515467 728 ntBASIC15.6■□□□□ 0.09
CLDN6P56747 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.6■□□□□ 0.09
CLDN6P56747 AC061975.2-201ENST00000581722 295 ntBASIC15.6■□□□□ 0.09
CLDN6P56747 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN6P56747 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.6■□□□□ 0.09
CLDN6P56747 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN6P56747 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN6P56747 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN6P56747 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN6P56747 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN6P56747 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN6P56747 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN6P56747 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN6P56747 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms