Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKN2DP55273 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKN2DP55273 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
CDKN2DP55273 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKN2DP55273 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDKN2DP55273 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 AC002056.1-201ENST00000395613 760 ntBASIC16.11■□□□□ 0.17
CDKN2DP55273 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CDKN2DP55273 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKN2DP55273 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKN2DP55273 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDKN2DP55273 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDKN2DP55273 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKN2DP55273 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKN2DP55273 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKN2DP55273 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 AC023274.1-201ENST00000418278 595 ntBASIC16.1■□□□□ 0.17
CDKN2DP55273 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKN2DP55273 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKN2DP55273 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.1■□□□□ 0.17
CDKN2DP55273 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKN2DP55273 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDKN2DP55273 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDKN2DP55273 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDKN2DP55273 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDKN2DP55273 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKN2DP55273 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKN2DP55273 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDKN2DP55273 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms