Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CLTCL1P53675 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CLTCL1P53675 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 FAM86MP-201ENST00000340703 885 ntBASIC22.92■■□□□ 1.26
CLTCL1P53675 RPL28-203ENST00000428193 573 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 RPL28-204ENST00000431533 590 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 PHKG1P2-201ENST00000457537 863 ntBASIC22.92■■□□□ 1.26
CLTCL1P53675 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.92■■□□□ 1.26
CLTCL1P53675 AC092658.1-201ENST00000505836 891 ntBASIC22.92■■□□□ 1.26
CLTCL1P53675 RPL28-207ENST00000558815 616 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC22.92■■□□□ 1.26
CLTCL1P53675 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CLTCL1P53675 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC22.92■■□□□ 1.26
CLTCL1P53675 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.92■■□□□ 1.26
CLTCL1P53675 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLTCL1P53675 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC22.92■■□□□ 1.26
CLTCL1P53675 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CLTCL1P53675 REXO1L6P-201ENST00000603433 1515 ntBASIC22.91■■□□□ 1.26
CLTCL1P53675 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CLTCL1P53675 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.91■■□□□ 1.26
CLTCL1P53675 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.91■■□□□ 1.26
CLTCL1P53675 AC107373.2-201ENST00000607735 490 ntBASIC22.91■■□□□ 1.26
CLTCL1P53675 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CLTCL1P53675 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLTCL1P53675 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC005229.1-201ENST00000392885 409 ntBASIC22.9■■□□□ 1.26
CLTCL1P53675 MPV17-206ENST00000402722 827 ntTSL 3 BASIC22.9■■□□□ 1.26
CLTCL1P53675 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22.9■■□□□ 1.26
CLTCL1P53675 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC22.9■■□□□ 1.26
CLTCL1P53675 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC133539.2-201ENST00000604757 467 ntBASIC22.9■■□□□ 1.26
CLTCL1P53675 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC006449.6-201ENST00000612330 2296 ntBASIC22.9■■□□□ 1.26
CLTCL1P53675 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.9■■□□□ 1.26
CLTCL1P53675 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22.9■■□□□ 1.26
CLTCL1P53675 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC22.9■■□□□ 1.26
CLTCL1P53675 CTBP2P5-201ENST00000454986 1264 ntBASIC22.9■■□□□ 1.26
CLTCL1P53675 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 TDH-203ENST00000531764 1110 ntBASIC22.9■■□□□ 1.26
CLTCL1P53675 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLTCL1P53675 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC22.9■■□□□ 1.26
CLTCL1P53675 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.89■■□□□ 1.26
CLTCL1P53675 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
CLTCL1P53675 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms