Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.83■□□□□ 0.13
PDX1P52945 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.83■□□□□ 0.13
PDX1P52945 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.83■□□□□ 0.13
PDX1P52945 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.83■□□□□ 0.12
PDX1P52945 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PDX1P52945 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.83■□□□□ 0.12
PDX1P52945 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.83■□□□□ 0.12
PDX1P52945 RPL37AP1-201ENST00000412502 279 ntBASIC15.83■□□□□ 0.12
PDX1P52945 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.83■□□□□ 0.12
PDX1P52945 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.83■□□□□ 0.12
PDX1P52945 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.83■□□□□ 0.12
PDX1P52945 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.83■□□□□ 0.12
PDX1P52945 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 AC004233.3-201ENST00000607794 1269 ntBASIC15.83■□□□□ 0.12
PDX1P52945 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.83■□□□□ 0.12
PDX1P52945 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.83■□□□□ 0.12
PDX1P52945 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 AC092171.3-201ENST00000610122 2651 ntBASIC15.83■□□□□ 0.12
PDX1P52945 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.83■□□□□ 0.12
PDX1P52945 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDX1P52945 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
PDX1P52945 AL118508.1-201ENST00000613502 2345 ntBASIC15.83■□□□□ 0.12
PDX1P52945 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 UBALD1-205ENST00000590891 2641 ntBASIC15.82■□□□□ 0.12
PDX1P52945 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 FLJ16779-201ENST00000612722 7638 ntBASIC15.82■□□□□ 0.12
PDX1P52945 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 AL353705.2-201ENST00000428243 662 ntBASIC15.82■□□□□ 0.12
PDX1P52945 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.82■□□□□ 0.12
PDX1P52945 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDX1P52945 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 FER1L4-210ENST00000615531 5998 ntBASIC15.82■□□□□ 0.12
PDX1P52945 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PDX1P52945 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PDX1P52945 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PDX1P52945 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDX1P52945 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
PDX1P52945 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms