Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 CYP4F24P-201ENST00000586049 1580 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN3P51790 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 PIN1P1-201ENST00000412108 996 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 GNAQP1-201ENST00000444815 1067 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCN3P51790 SPDYE18-201ENST00000510091 1050 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 AP005018.1-201ENST00000525475 301 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 ZNF890P-202ENST00000530367 1156 ntBASIC17.84■□□□□ 0.45
CLCN3P51790 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.84■□□□□ 0.45
CLCN3P51790 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLCN3P51790 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN3P51790 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN3P51790 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.83■□□□□ 0.45
CLCN3P51790 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN3P51790 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.83■□□□□ 0.45
CLCN3P51790 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN3P51790 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN3P51790 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.83■□□□□ 0.45
CLCN3P51790 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CLCN3P51790 ME2P1-201ENST00000426028 1970 ntBASIC17.83■□□□□ 0.44
CLCN3P51790 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN3P51790 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
CLCN3P51790 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN3P51790 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLCN3P51790 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN3P51790 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN3P51790 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN3P51790 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN3P51790 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLCN3P51790 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CLCN3P51790 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN3P51790 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN3P51790 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN3P51790 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN3P51790 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLCN3P51790 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLCN3P51790 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCN3P51790 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN3P51790 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN3P51790 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 SPDYE22P-201ENST00000582158 798 ntBASIC17.82■□□□□ 0.44
CLCN3P51790 AC012645.4-201ENST00000610691 1061 ntBASIC17.82■□□□□ 0.44
CLCN3P51790 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 AL662799.1-202ENST00000614205 422 ntBASIC17.82■□□□□ 0.44
CLCN3P51790 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.82■□□□□ 0.44
CLCN3P51790 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLCN3P51790 LTB4R2-202ENST00000528054 3092 ntBASIC17.82■□□□□ 0.44
CLCN3P51790 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN3P51790 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN3P51790 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN3P51790 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN3P51790 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN3P51790 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN3P51790 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN3P51790 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN3P51790 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN3P51790 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms