Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRP9P49458 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.57□□□□□ -0.08
SRP9P49458 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SRP9P49458 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.56□□□□□ -0.08
SRP9P49458 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 AC006504.4-201ENST00000592118 1568 ntBASIC14.56□□□□□ -0.08
SRP9P49458 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SRP9P49458 AC022532.1-201ENST00000624563 1728 ntBASIC14.56□□□□□ -0.08
SRP9P49458 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SRP9P49458 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.56□□□□□ -0.08
SRP9P49458 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.56□□□□□ -0.08
SRP9P49458 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.56□□□□□ -0.08
SRP9P49458 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.56□□□□□ -0.08
SRP9P49458 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SRP9P49458 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.56□□□□□ -0.08
SRP9P49458 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.56□□□□□ -0.08
SRP9P49458 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.56□□□□□ -0.08
SRP9P49458 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.56□□□□□ -0.08
SRP9P49458 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.56□□□□□ -0.08
SRP9P49458 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRP9P49458 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 PRAL-201ENST00000624952 3286 ntBASIC14.55□□□□□ -0.08
SRP9P49458 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 AC073621.1-201ENST00000392730 636 ntBASIC14.55□□□□□ -0.08
SRP9P49458 PTCHD3P3-201ENST00000403073 906 ntBASIC14.55□□□□□ -0.08
SRP9P49458 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 RPS15P9-201ENST00000494093 319 ntBASIC14.55□□□□□ -0.08
SRP9P49458 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.55□□□□□ -0.08
SRP9P49458 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 MIR7706-201ENST00000613747 67 ntBASIC14.55□□□□□ -0.08
SRP9P49458 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.55□□□□□ -0.08
SRP9P49458 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 AF228730.7-201ENST00000641842 219 ntBASIC14.55□□□□□ -0.08
SRP9P49458 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms