Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 SERBP1P3-201ENST00000459980 809 ntBASIC17.28■□□□□ 0.36
BRCC3P46736 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.28■□□□□ 0.36
BRCC3P46736 AC104794.3-201ENST00000566840 1248 ntBASIC17.28■□□□□ 0.36
BRCC3P46736 SPDYE22P-201ENST00000582158 798 ntBASIC17.28■□□□□ 0.36
BRCC3P46736 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 REXO1L8P-201ENST00000604378 1897 ntBASIC17.28■□□□□ 0.36
BRCC3P46736 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.28■□□□□ 0.36
BRCC3P46736 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BRCC3P46736 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BRCC3P46736 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
BRCC3P46736 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.27■□□□□ 0.36
BRCC3P46736 AL592424.1-201ENST00000563624 1536 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.27■□□□□ 0.36
BRCC3P46736 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.27■□□□□ 0.36
BRCC3P46736 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.27■□□□□ 0.36
BRCC3P46736 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.27■□□□□ 0.36
BRCC3P46736 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BRCC3P46736 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BRCC3P46736 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BRCC3P46736 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BRCC3P46736 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.27■□□□□ 0.36
BRCC3P46736 AC005034.1-201ENST00000426657 489 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.27■□□□□ 0.36
BRCC3P46736 ZNF890P-202ENST00000530367 1156 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BRCC3P46736 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.27■□□□□ 0.36
BRCC3P46736 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.27■□□□□ 0.36
BRCC3P46736 AL132655.2-201ENST00000596276 594 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
BRCC3P46736 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 AL035252.4-201ENST00000624174 288 ntBASIC17.27■□□□□ 0.36
BRCC3P46736 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.27■□□□□ 0.36
BRCC3P46736 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRCC3P46736 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BRCC3P46736 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRCC3P46736 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
BRCC3P46736 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BRCC3P46736 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 PCDHA12-202ENST00000613593 2588 ntBASIC17.26■□□□□ 0.35
BRCC3P46736 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.26■□□□□ 0.35
BRCC3P46736 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 AC005225.4-201ENST00000557330 545 ntBASIC17.26■□□□□ 0.35
BRCC3P46736 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 AC012645.4-201ENST00000610691 1061 ntBASIC17.26■□□□□ 0.35
BRCC3P46736 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.26■□□□□ 0.35
BRCC3P46736 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BRCC3P46736 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRCC3P46736 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.26■□□□□ 0.35
BRCC3P46736 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 BTBD7P1-201ENST00000447253 1453 ntBASIC17.25■□□□□ 0.35
BRCC3P46736 AC007541.1-201ENST00000570282 1469 ntBASIC17.25■□□□□ 0.35
BRCC3P46736 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCC3P46736 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms