Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.96■□□□□ 0.47
HTTP42858 AC134698.3-201ENST00000523880 214 ntBASIC17.96■□□□□ 0.47
HTTP42858 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.96■□□□□ 0.47
HTTP42858 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTTP42858 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.96■□□□□ 0.47
HTTP42858 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 BAATP1-201ENST00000412284 1225 ntBASIC17.96■□□□□ 0.47
HTTP42858 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.96■□□□□ 0.47
HTTP42858 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.96■□□□□ 0.47
HTTP42858 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
HTTP42858 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.95■□□□□ 0.46
HTTP42858 AZGP1P1-201ENST00000411909 902 ntBASIC17.95■□□□□ 0.46
HTTP42858 FAM197Y7-201ENST00000432892 766 ntBASIC17.95■□□□□ 0.46
HTTP42858 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.95■□□□□ 0.46
HTTP42858 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
HTTP42858 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.95■□□□□ 0.46
HTTP42858 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.95■□□□□ 0.46
HTTP42858 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.95■□□□□ 0.46
HTTP42858 AL590640.2-201ENST00000457038 527 ntBASIC17.95■□□□□ 0.46
HTTP42858 AC008267.1-201ENST00000474858 1069 ntBASIC17.95■□□□□ 0.46
HTTP42858 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HTTP42858 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 FGFR3P5-201ENST00000564496 886 ntBASIC17.95■□□□□ 0.46
HTTP42858 AL138688.1-201ENST00000624851 1594 ntBASIC17.95■□□□□ 0.46
HTTP42858 AL138709.1-201ENST00000614840 1693 ntBASIC17.95■□□□□ 0.46
HTTP42858 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.95■□□□□ 0.46
HTTP42858 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
HTTP42858 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTTP42858 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HTTP42858 AL391256.1-201ENST00000443260 1855 ntBASIC17.94■□□□□ 0.46
HTTP42858 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HTTP42858 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.94■□□□□ 0.46
HTTP42858 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 C1QBPP1-201ENST00000400117 770 ntBASIC17.94■□□□□ 0.46
HTTP42858 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.94■□□□□ 0.46
HTTP42858 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.94■□□□□ 0.46
HTTP42858 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.94■□□□□ 0.46
HTTP42858 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.94■□□□□ 0.46
HTTP42858 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.94■□□□□ 0.46
HTTP42858 KRT18P66-201ENST00000452970 1269 ntBASIC17.94■□□□□ 0.46
HTTP42858 AC078819.1-201ENST00000547454 765 ntBASIC17.94■□□□□ 0.46
HTTP42858 AC012085.1-201ENST00000548270 765 ntBASIC17.94■□□□□ 0.46
HTTP42858 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.94■□□□□ 0.46
HTTP42858 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.94■□□□□ 0.46
HTTP42858 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.94■□□□□ 0.46
HTTP42858 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.94■□□□□ 0.46
HTTP42858 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 AC015818.8-201ENST00000587907 1519 ntBASIC17.94■□□□□ 0.46
HTTP42858 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTTP42858 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms