Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 AL603832.2-201ENST00000566195 2125 ntBASIC16.55■□□□□ 0.24
HADHAP40939 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 PMS2P7-201ENST00000506558 1336 ntBASIC16.55■□□□□ 0.24
HADHAP40939 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 MIR940-201ENST00000401276 94 ntBASIC16.55■□□□□ 0.24
HADHAP40939 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 AC112191.1-201ENST00000523689 701 ntBASIC16.55■□□□□ 0.24
HADHAP40939 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.55■□□□□ 0.24
HADHAP40939 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.55■□□□□ 0.24
HADHAP40939 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HADHAP40939 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HADHAP40939 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HADHAP40939 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HADHAP40939 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.54■□□□□ 0.24
HADHAP40939 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HADHAP40939 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.54■□□□□ 0.24
HADHAP40939 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.54■□□□□ 0.24
HADHAP40939 AC002347.1-201ENST00000569543 541 ntBASIC16.54■□□□□ 0.24
HADHAP40939 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 AC092865.6-201ENST00000642101 219 ntBASIC16.54■□□□□ 0.24
HADHAP40939 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HADHAP40939 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.54■□□□□ 0.24
HADHAP40939 CICP6-201ENST00000457191 2729 ntBASIC16.54■□□□□ 0.24
HADHAP40939 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HADHAP40939 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 AC105917.1-201ENST00000506637 2539 ntBASIC16.53■□□□□ 0.24
HADHAP40939 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 KRT18P34-201ENST00000488218 1270 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms