Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.58■□□□□ 0.56
COPB2P35606 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.58■□□□□ 0.56
COPB2P35606 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.58■□□□□ 0.56
COPB2P35606 MIR4321-201ENST00000592276 80 ntBASIC18.58■□□□□ 0.56
COPB2P35606 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.58■□□□□ 0.56
COPB2P35606 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COPB2P35606 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
COPB2P35606 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
COPB2P35606 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COPB2P35606 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.57■□□□□ 0.56
COPB2P35606 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COPB2P35606 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
COPB2P35606 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.57■□□□□ 0.56
COPB2P35606 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.57■□□□□ 0.56
COPB2P35606 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
COPB2P35606 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.57■□□□□ 0.56
COPB2P35606 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 UBALD1-205ENST00000590891 2641 ntBASIC18.57■□□□□ 0.56
COPB2P35606 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.57■□□□□ 0.56
COPB2P35606 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
COPB2P35606 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COPB2P35606 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPB2P35606 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.56■□□□□ 0.56
COPB2P35606 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COPB2P35606 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COPB2P35606 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COPB2P35606 DGCR5-201ENST00000399539 862 ntBASIC18.56■□□□□ 0.56
COPB2P35606 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.56■□□□□ 0.56
COPB2P35606 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COPB2P35606 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.56■□□□□ 0.56
COPB2P35606 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 GPR53P-205ENST00000457298 1084 ntBASIC18.56■□□□□ 0.56
COPB2P35606 RN7SL752P-201ENST00000463779 287 ntBASIC18.56■□□□□ 0.56
COPB2P35606 MEIS3P1-201ENST00000495167 958 ntBASIC18.56■□□□□ 0.56
COPB2P35606 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.56■□□□□ 0.56
COPB2P35606 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.56■□□□□ 0.56
COPB2P35606 TPRX2P-201ENST00000535362 881 ntBASIC18.56■□□□□ 0.56
COPB2P35606 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COPB2P35606 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COPB2P35606 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COPB2P35606 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 AC004461.2-201ENST00000629517 803 ntBASIC18.56■□□□□ 0.56
COPB2P35606 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.56■□□□□ 0.56
COPB2P35606 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPB2P35606 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms