Protein–RNA interactions for Protein: P28290

SSFA2, Sperm-specific antigen 2, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2P28290 AC138749.3-201ENST00000567691 622 ntBASIC20.91■□□□□ 0.94
SSFA2P28290 AC084346.2-201ENST00000607097 949 ntBASIC20.91■□□□□ 0.94
SSFA2P28290 AC116165.1-201ENST00000611806 668 ntBASIC20.91■□□□□ 0.94
SSFA2P28290 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.91■□□□□ 0.94
SSFA2P28290 AC004461.2-201ENST00000629517 803 ntBASIC20.91■□□□□ 0.94
SSFA2P28290 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SSFA2P28290 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSFA2P28290 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSFA2P28290 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSFA2P28290 PCDHA14-201ENST00000506751 2298 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 AC060834.1-201ENST00000443027 2032 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.9■□□□□ 0.94
SSFA2P28290 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 KRT8P12-202ENST00000472924 1397 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 AC007389.4-201ENST00000454674 793 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.9■□□□□ 0.94
SSFA2P28290 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.9■□□□□ 0.94
SSFA2P28290 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.9■□□□□ 0.94
SSFA2P28290 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.9■□□□□ 0.94
SSFA2P28290 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SSFA2P28290 AC133552.6-201ENST00000613406 534 ntBASIC20.9■□□□□ 0.94
SSFA2P28290 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.9■□□□□ 0.94
SSFA2P28290 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.9■□□□□ 0.94
SSFA2P28290 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.9■□□□□ 0.94
SSFA2P28290 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SSFA2P28290 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSFA2P28290 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.89■□□□□ 0.94
SSFA2P28290 REXO1L6P-201ENST00000603433 1515 ntBASIC20.89■□□□□ 0.94
SSFA2P28290 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSFA2P28290 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSFA2P28290 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SSFA2P28290 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SSFA2P28290 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 SPDYE17-201ENST00000412399 783 ntBASIC20.89■□□□□ 0.93
SSFA2P28290 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.89■□□□□ 0.93
SSFA2P28290 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.89■□□□□ 0.93
SSFA2P28290 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.89■□□□□ 0.93
SSFA2P28290 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.89■□□□□ 0.93
SSFA2P28290 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.89■□□□□ 0.93
SSFA2P28290 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
SSFA2P28290 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SSFA2P28290 AC093726.1-201ENST00000608064 963 ntBASIC20.89■□□□□ 0.93
SSFA2P28290 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.89■□□□□ 0.93
SSFA2P28290 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SSFA2P28290 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSFA2P28290 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SSFA2P28290 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.89■□□□□ 0.93
SSFA2P28290 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SSFA2P28290 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.89■□□□□ 0.93
SSFA2P28290 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
SSFA2P28290 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.88■□□□□ 0.93
SSFA2P28290 FAM86MP-201ENST00000340703 885 ntBASIC20.88■□□□□ 0.93
SSFA2P28290 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.88■□□□□ 0.93
SSFA2P28290 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.88■□□□□ 0.93
SSFA2P28290 AC092552.1-201ENST00000547243 906 ntBASIC20.88■□□□□ 0.93
SSFA2P28290 SNX29P1-201ENST00000548357 1007 ntBASIC20.88■□□□□ 0.93
SSFA2P28290 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.88■□□□□ 0.93
SSFA2P28290 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.88■□□□□ 0.93
SSFA2P28290 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.88■□□□□ 0.93
SSFA2P28290 MIR6775-201ENST00000617557 69 ntBASIC20.88■□□□□ 0.93
SSFA2P28290 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SSFA2P28290 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSFA2P28290 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.88■□□□□ 0.93
SSFA2P28290 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms