Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.27■□□□□ 0.03
NR4A1P22736 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NR4A1P22736 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.27■□□□□ 0.03
NR4A1P22736 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A1P22736 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 AC103564.2-201ENST00000432853 1299 ntBASIC15.26■□□□□ 0.03
NR4A1P22736 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 SAPCD2P3-201ENST00000455031 850 ntBASIC15.26■□□□□ 0.03
NR4A1P22736 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.26■□□□□ 0.03
NR4A1P22736 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR4A1P22736 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A1P22736 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NR4A1P22736 AC006058.4-201ENST00000624016 1670 ntBASIC15.25■□□□□ 0.03
NR4A1P22736 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NR4A1P22736 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 AKR1C7P-201ENST00000305623 895 ntBASIC15.25■□□□□ 0.03
NR4A1P22736 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.25■□□□□ 0.03
NR4A1P22736 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 ABCD1P5-201ENST00000445663 754 ntBASIC15.25■□□□□ 0.03
NR4A1P22736 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.25■□□□□ 0.03
NR4A1P22736 AC002558.1-201ENST00000488906 803 ntBASIC15.25■□□□□ 0.03
NR4A1P22736 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 AP005117.1-202ENST00000581724 1908 ntBASIC15.25■□□□□ 0.03
NR4A1P22736 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.25■□□□□ 0.03
NR4A1P22736 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A1P22736 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A1P22736 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 AP003680.1-201ENST00000598970 3660 ntBASIC15.24■□□□□ 0.03
NR4A1P22736 AC023908.3-201ENST00000564211 3047 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms