Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 PMS2P2-201ENST00000425039 1128 ntBASIC16.07■□□□□ 0.16
CDH3P22223 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH3P22223 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.07■□□□□ 0.16
CDH3P22223 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH3P22223 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDH3P22223 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 WASH6P-202ENST00000359512 1437 ntBASIC16.07■□□□□ 0.16
CDH3P22223 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CDH3P22223 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDH3P22223 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH3P22223 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH3P22223 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH3P22223 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.06■□□□□ 0.16
CDH3P22223 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 AC005237.2-201ENST00000434368 219 ntBASIC16.06■□□□□ 0.16
CDH3P22223 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH3P22223 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH3P22223 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH3P22223 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 AC013467.2-201ENST00000605472 835 ntBASIC16.06■□□□□ 0.16
CDH3P22223 AC021097.1-201ENST00000607902 574 ntBASIC16.06■□□□□ 0.16
CDH3P22223 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH3P22223 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDH3P22223 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH3P22223 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH3P22223 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CDH3P22223 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH3P22223 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH3P22223 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms