Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 LINC02199-201ENST00000506655 2702 ntBASIC16.79■□□□□ 0.28
ERCC2P18074 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ERCC2P18074 AC004461.1-201ENST00000412461 403 ntBASIC16.79■□□□□ 0.28
ERCC2P18074 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.79■□□□□ 0.28
ERCC2P18074 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.79■□□□□ 0.28
ERCC2P18074 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.79■□□□□ 0.28
ERCC2P18074 AL365330.1-201ENST00000607459 531 ntBASIC16.79■□□□□ 0.28
ERCC2P18074 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 UXT-AS1-201ENST00000590504 1525 ntBASIC16.79■□□□□ 0.28
ERCC2P18074 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
ERCC2P18074 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC2P18074 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ERCC2P18074 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 KRT18P13-201ENST00000400056 1290 ntBASIC16.78■□□□□ 0.28
ERCC2P18074 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 AC211486.1-202ENST00000416371 468 ntBASIC16.78■□□□□ 0.28
ERCC2P18074 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.78■□□□□ 0.28
ERCC2P18074 AC211476.1-201ENST00000503899 468 ntBASIC16.78■□□□□ 0.28
ERCC2P18074 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 AC084121.4-201ENST00000641598 221 ntBASIC16.78■□□□□ 0.28
ERCC2P18074 AF228730.8-201ENST00000642140 221 ntBASIC16.78■□□□□ 0.28
ERCC2P18074 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERCC2P18074 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
ERCC2P18074 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
ERCC2P18074 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ERCC2P18074 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.77■□□□□ 0.28
ERCC2P18074 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC2P18074 AC024909.3-201ENST00000611513 2257 ntBASIC16.77■□□□□ 0.28
ERCC2P18074 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms