Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GAP43P17677 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
GAP43P17677 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
GAP43P17677 AC254562.1-201ENST00000417586 456 ntBASIC17.97■□□□□ 0.47
GAP43P17677 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 RNA5SP410-201ENST00000516285 106 ntBASIC17.97■□□□□ 0.47
GAP43P17677 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.97■□□□□ 0.47
GAP43P17677 AC093520.2-201ENST00000561830 333 ntBASIC17.97■□□□□ 0.47
GAP43P17677 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.97■□□□□ 0.47
GAP43P17677 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.97■□□□□ 0.47
GAP43P17677 AC023511.2-201ENST00000618803 211 ntBASIC17.97■□□□□ 0.47
GAP43P17677 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.97■□□□□ 0.47
GAP43P17677 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.97■□□□□ 0.47
GAP43P17677 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAP43P17677 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.96■□□□□ 0.47
GAP43P17677 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
GAP43P17677 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 KRT18P32-201ENST00000424695 1287 ntBASIC17.96■□□□□ 0.47
GAP43P17677 AC004967.1-201ENST00000453589 447 ntBASIC17.96■□□□□ 0.47
GAP43P17677 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GAP43P17677 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.96■□□□□ 0.47
GAP43P17677 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.96■□□□□ 0.47
GAP43P17677 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.96■□□□□ 0.47
GAP43P17677 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
GAP43P17677 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 AL603832.2-201ENST00000566195 2125 ntBASIC17.96■□□□□ 0.47
GAP43P17677 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAP43P17677 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
GAP43P17677 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
GAP43P17677 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GAP43P17677 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.96■□□□□ 0.46
GAP43P17677 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
GAP43P17677 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
GAP43P17677 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GAP43P17677 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.95■□□□□ 0.46
GAP43P17677 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.95■□□□□ 0.46
GAP43P17677 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.95■□□□□ 0.46
GAP43P17677 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.95■□□□□ 0.46
GAP43P17677 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.95■□□□□ 0.46
GAP43P17677 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GAP43P17677 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.95■□□□□ 0.46
GAP43P17677 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 AC134684.3-201ENST00000641758 218 ntBASIC17.95■□□□□ 0.46
GAP43P17677 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 AP3S2-216ENST00000617003 1561 ntBASIC17.95■□□□□ 0.46
GAP43P17677 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAP43P17677 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GAP43P17677 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GAP43P17677 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GAP43P17677 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms