Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 RN7SL828P-201ENST00000607615 303 ntBASIC12.77□□□□□ -0.37
CD28P10747 AC004233.3-201ENST00000607794 1269 ntBASIC12.77□□□□□ -0.37
CD28P10747 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 AC009118.2-201ENST00000613275 655 ntBASIC12.77□□□□□ -0.37
CD28P10747 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.77□□□□□ -0.37
CD28P10747 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CD28P10747 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
CD28P10747 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CD28P10747 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CD28P10747 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 AD000864.1-201ENST00000624076 2295 ntBASIC12.76□□□□□ -0.37
CD28P10747 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CD28P10747 CRB3P1-201ENST00000449338 276 ntBASIC12.76□□□□□ -0.37
CD28P10747 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 AP002490.2-201ENST00000524791 560 ntBASIC12.76□□□□□ -0.37
CD28P10747 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 AC063926.2-201ENST00000623766 1308 ntBASIC12.76□□□□□ -0.37
CD28P10747 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CD28P10747 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.76□□□□□ -0.37
CD28P10747 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD28P10747 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CD28P10747 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 AL645728.1-201ENST00000366221 2101 ntBASIC12.75□□□□□ -0.37
CD28P10747 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 RPL37AP1-201ENST00000412502 279 ntBASIC12.75□□□□□ -0.37
CD28P10747 AC244107.1-201ENST00000442033 332 ntBASIC12.75□□□□□ -0.37
CD28P10747 AC060834.1-201ENST00000443027 2032 ntBASIC12.75□□□□□ -0.37
CD28P10747 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 AP005018.1-201ENST00000525475 301 ntBASIC12.75□□□□□ -0.37
CD28P10747 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms