Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 RNA5SP419-201ENST00000515908 135 ntBASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HNRNPCL4P0DMR1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 AC092919.2-201ENST00000623631 1645 ntBASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HNRNPCL4P0DMR1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 AL009183.1-201ENST00000603760 355 ntBASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HNRNPCL4P0DMR1 AC126755.1-201ENST00000525846 6405 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 PAUPAR-201ENST00000630360 2965 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 KRT18P34-201ENST00000488218 1270 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AC079776.4-201ENST00000511039 504 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 KRT126P-201ENST00000549467 1181 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AC023141.13-201ENST00000604991 943 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AC010507.1-201ENST00000633895 436 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 AP005117.1-202ENST00000581724 1908 ntBASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms