Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.4■□□□□ 0.38
FAM228BP0C875 AC092474.2-201ENST00000424288 719 ntBASIC17.4■□□□□ 0.38
FAM228BP0C875 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.4■□□□□ 0.38
FAM228BP0C875 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.4■□□□□ 0.38
FAM228BP0C875 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
FAM228BP0C875 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
FAM228BP0C875 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FAM228BP0C875 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.39■□□□□ 0.38
FAM228BP0C875 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.39■□□□□ 0.38
FAM228BP0C875 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 TSPY26P-202ENST00000565928 3884 ntBASIC17.39■□□□□ 0.37
FAM228BP0C875 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
FAM228BP0C875 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.39■□□□□ 0.37
FAM228BP0C875 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.39■□□□□ 0.37
FAM228BP0C875 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
FAM228BP0C875 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.39■□□□□ 0.37
FAM228BP0C875 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 AL078644.1-201ENST00000609881 752 ntBASIC17.39■□□□□ 0.37
FAM228BP0C875 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FAM228BP0C875 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.39■□□□□ 0.37
FAM228BP0C875 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FAM228BP0C875 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.38■□□□□ 0.37
FAM228BP0C875 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FAM228BP0C875 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.38■□□□□ 0.37
FAM228BP0C875 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FAM228BP0C875 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FAM228BP0C875 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FAM228BP0C875 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
FAM228BP0C875 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FAM228BP0C875 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FAM228BP0C875 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.38■□□□□ 0.37
FAM228BP0C875 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FAM228BP0C875 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms