Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD48P09326 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.91■□□□□ 0.3
CD48P09326 FAM58CP-201ENST00000435741 640 ntBASIC16.91■□□□□ 0.3
CD48P09326 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.91■□□□□ 0.3
CD48P09326 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CD48P09326 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.91■□□□□ 0.3
CD48P09326 RARRES2P8-201ENST00000566335 367 ntBASIC16.91■□□□□ 0.3
CD48P09326 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.91■□□□□ 0.3
CD48P09326 AC002347.1-201ENST00000569543 541 ntBASIC16.91■□□□□ 0.3
CD48P09326 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.91■□□□□ 0.3
CD48P09326 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CD48P09326 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CD48P09326 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CD48P09326 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD48P09326 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CD48P09326 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.9■□□□□ 0.3
CD48P09326 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 MIR648-201ENST00000385046 94 ntBASIC16.9■□□□□ 0.3
CD48P09326 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 AL355306.1-201ENST00000415580 579 ntBASIC16.9■□□□□ 0.3
CD48P09326 ADH5P3-201ENST00000433842 1137 ntBASIC16.9■□□□□ 0.3
CD48P09326 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 AL135744.1-201ENST00000565098 629 ntBASIC16.9■□□□□ 0.3
CD48P09326 AC040169.1-201ENST00000565382 521 ntBASIC16.9■□□□□ 0.3
CD48P09326 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.9■□□□□ 0.3
CD48P09326 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD48P09326 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.9■□□□□ 0.3
CD48P09326 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.9■□□□□ 0.3
CD48P09326 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.9■□□□□ 0.3
CD48P09326 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD48P09326 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CD48P09326 AC008677.1-201ENST00000519230 1561 ntBASIC16.89■□□□□ 0.3
CD48P09326 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CD48P09326 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CD48P09326 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
CD48P09326 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 AL671277.1-201ENST00000429656 993 ntBASIC16.89■□□□□ 0.29
CD48P09326 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CD48P09326 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.89■□□□□ 0.29
CD48P09326 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CD48P09326 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.89■□□□□ 0.29
CD48P09326 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD48P09326 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms