Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RETP07949 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.44■□□□□ 0.22
RETP07949 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.44■□□□□ 0.22
RETP07949 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.44■□□□□ 0.22
RETP07949 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.44■□□□□ 0.22
RETP07949 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.44■□□□□ 0.22
RETP07949 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RETP07949 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RETP07949 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RETP07949 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.43■□□□□ 0.22
RETP07949 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.43■□□□□ 0.22
RETP07949 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RETP07949 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 AL603756.1-201ENST00000606511 2163 ntBASIC16.43■□□□□ 0.22
RETP07949 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.43■□□□□ 0.22
RETP07949 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
RETP07949 FAM86MP-201ENST00000340703 885 ntBASIC16.43■□□□□ 0.22
RETP07949 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.43■□□□□ 0.22
RETP07949 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.43■□□□□ 0.22
RETP07949 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.43■□□□□ 0.22
RETP07949 RN7SL837P-201ENST00000463010 287 ntBASIC16.43■□□□□ 0.22
RETP07949 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.43■□□□□ 0.22
RETP07949 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.43■□□□□ 0.22
RETP07949 AC092552.1-201ENST00000547243 906 ntBASIC16.43■□□□□ 0.22
RETP07949 MIR4259-201ENST00000584466 101 ntBASIC16.43■□□□□ 0.22
RETP07949 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.43■□□□□ 0.22
RETP07949 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RETP07949 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RETP07949 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 REXO1L6P-201ENST00000603433 1515 ntBASIC16.43■□□□□ 0.22
RETP07949 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RETP07949 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RETP07949 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.43■□□□□ 0.22
RETP07949 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RETP07949 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RETP07949 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RETP07949 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
RETP07949 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.42■□□□□ 0.22
RETP07949 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.42■□□□□ 0.22
RETP07949 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RETP07949 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
RETP07949 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.42■□□□□ 0.22
RETP07949 KRT223P-202ENST00000449164 1292 ntBASIC16.42■□□□□ 0.22
RETP07949 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.42■□□□□ 0.22
RETP07949 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.42■□□□□ 0.22
RETP07949 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.42■□□□□ 0.22
RETP07949 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.42■□□□□ 0.22
RETP07949 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RETP07949 DOC2GP-204ENST00000639052 2548 ntBASIC16.42■□□□□ 0.22
RETP07949 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
RETP07949 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RETP07949 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms