Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AC004870.1-201ENST00000315132 882 ntBASIC14.75□□□□□ -0.05
HLA-DPB1P04440 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AC079781.3-201ENST00000449110 356 ntBASIC14.75□□□□□ -0.05
HLA-DPB1P04440 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 MTDHP4-201ENST00000600287 670 ntBASIC14.75□□□□□ -0.05
HLA-DPB1P04440 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.75□□□□□ -0.05
HLA-DPB1P04440 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 PRAL-201ENST00000624952 3286 ntBASIC14.75□□□□□ -0.05
HLA-DPB1P04440 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AC021087.4-201ENST00000563761 564 ntBASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AL121912.1-201ENST00000603683 238 ntBASIC14.74□□□□□ -0.05
HLA-DPB1P04440 TP73-AS1-207ENST00000624167 988 ntBASIC14.74□□□□□ -0.05
HLA-DPB1P04440 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DPB1P04440 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 TNRC18P2-201ENST00000417666 2714 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms