Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LCATP04180 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
LCATP04180 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.33□□□□□ -0.11
LCATP04180 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LCATP04180 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 AC005622.1-201ENST00000636801 1703 ntBASIC14.33□□□□□ -0.12
LCATP04180 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 PCDHA1-201ENST00000378133 2726 ntBASIC14.33□□□□□ -0.12
LCATP04180 AC068418.2-201ENST00000577309 3703 ntBASIC14.33□□□□□ -0.12
LCATP04180 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.33□□□□□ -0.12
LCATP04180 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.33□□□□□ -0.12
LCATP04180 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 KRT18P2-201ENST00000447938 1258 ntBASIC14.33□□□□□ -0.12
LCATP04180 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 SLC25A1P1-201ENST00000528351 927 ntBASIC14.33□□□□□ -0.12
LCATP04180 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.33□□□□□ -0.12
LCATP04180 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 KRT19P2-202ENST00000557173 1012 ntBASIC14.33□□□□□ -0.12
LCATP04180 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.33□□□□□ -0.12
LCATP04180 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.33□□□□□ -0.12
LCATP04180 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.33□□□□□ -0.12
LCATP04180 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 AL009183.1-201ENST00000603760 355 ntBASIC14.33□□□□□ -0.12
LCATP04180 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LCATP04180 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LCATP04180 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LCATP04180 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCATP04180 AL596087.1-201ENST00000400979 1969 ntBASIC14.33□□□□□ -0.12
LCATP04180 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.32□□□□□ -0.12
LCATP04180 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LCATP04180 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LCATP04180 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.32□□□□□ -0.12
LCATP04180 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
LCATP04180 REXO1L8P-201ENST00000604378 1897 ntBASIC14.32□□□□□ -0.12
LCATP04180 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCATP04180 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms