Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 AC009947.1-201ENST00000444350 727 ntBASIC15.88■□□□□ 0.13
KRT6AP02538 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 AL662844.1-201ENST00000546340 181 ntBASIC15.88■□□□□ 0.13
KRT6AP02538 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.88■□□□□ 0.13
KRT6AP02538 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
KRT6AP02538 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT6AP02538 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT6AP02538 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.87■□□□□ 0.13
KRT6AP02538 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT6AP02538 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT6AP02538 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
KRT6AP02538 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KRT6AP02538 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT6AP02538 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms