Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
COL1A1P02452 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COL1A1P02452 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.4■□□□□ 0.7
COL1A1P02452 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.4■□□□□ 0.7
COL1A1P02452 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.4■□□□□ 0.7
COL1A1P02452 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.4■□□□□ 0.7
COL1A1P02452 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.4■□□□□ 0.7
COL1A1P02452 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
COL1A1P02452 HNRNPUP1-201ENST00000554987 333 ntBASIC19.4■□□□□ 0.7
COL1A1P02452 AC243562.2-201ENST00000561247 970 ntBASIC19.4■□□□□ 0.7
COL1A1P02452 CTBP2P3-201ENST00000585629 1255 ntBASIC19.4■□□□□ 0.7
COL1A1P02452 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.4■□□□□ 0.7
COL1A1P02452 AC093726.1-201ENST00000608064 963 ntBASIC19.4■□□□□ 0.7
COL1A1P02452 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL1A1P02452 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL1A1P02452 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL1A1P02452 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL1A1P02452 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
COL1A1P02452 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL1A1P02452 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COL1A1P02452 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 TMEM14DP-201ENST00000422205 345 ntBASIC19.39■□□□□ 0.69
COL1A1P02452 AC022210.1-201ENST00000449856 793 ntBASIC19.39■□□□□ 0.69
COL1A1P02452 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.39■□□□□ 0.69
COL1A1P02452 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.39■□□□□ 0.69
COL1A1P02452 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.39■□□□□ 0.69
COL1A1P02452 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.39■□□□□ 0.69
COL1A1P02452 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 RPSAP52-203ENST00000622976 1023 ntBASIC19.39■□□□□ 0.69
COL1A1P02452 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.39■□□□□ 0.69
COL1A1P02452 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COL1A1P02452 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL1A1P02452 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A1P02452 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.38■□□□□ 0.69
COL1A1P02452 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL1A1P02452 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A1P02452 KRT18P64-201ENST00000434946 1219 ntBASIC19.38■□□□□ 0.69
COL1A1P02452 TARDBPP1-201ENST00000442013 1203 ntBASIC19.38■□□□□ 0.69
COL1A1P02452 AC119751.2-201ENST00000504529 210 ntBASIC19.38■□□□□ 0.69
COL1A1P02452 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A1P02452 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.38■□□□□ 0.69
COL1A1P02452 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL1A1P02452 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.38■□□□□ 0.69
COL1A1P02452 AC006449.6-201ENST00000612330 2296 ntBASIC19.38■□□□□ 0.69
COL1A1P02452 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.38■□□□□ 0.69
COL1A1P02452 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL1A1P02452 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL1A1P02452 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL1A1P02452 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms