Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB1P01911 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DRB1P01911 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HLA-DRB1P01911 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DRB1P01911 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 AC091812.2-201ENST00000619081 385 ntBASIC13.16□□□□□ -0.3
HLA-DRB1P01911 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 LINC02199-201ENST00000506655 2702 ntBASIC13.16□□□□□ -0.3
HLA-DRB1P01911 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DRB1P01911 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 WASH6P-202ENST00000359512 1437 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 PCGF3-213ENST00000620529 1899 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 MKNK2P1-201ENST00000437526 628 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 ACTG1P14-201ENST00000446382 1122 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 KRT18P34-201ENST00000488218 1270 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 AL078644.1-201ENST00000609881 752 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 C20orf181-201ENST00000623918 480 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 LINC01144-201ENST00000626198 1710 ntBASIC13.15□□□□□ -0.3
HLA-DRB1P01911 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DRB1P01911 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HLA-DRB1P01911 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HLA-DRB1P01911 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
HLA-DRB1P01911 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HLA-DRB1P01911 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HLA-DRB1P01911 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DRB1P01911 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms