Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 AP005117.1-201ENST00000584346 1413 ntBASIC18.75■□□□□ 0.59
MBD3O95983 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.75■□□□□ 0.59
MBD3O95983 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MBD3O95983 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD3O95983 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD3O95983 TSSC2-201ENST00000450217 709 ntBASIC18.75■□□□□ 0.59
MBD3O95983 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MBD3O95983 SLC25A6P2-201ENST00000497974 877 ntBASIC18.75■□□□□ 0.59
MBD3O95983 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD3O95983 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD3O95983 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 AC092329.2-201ENST00000598402 547 ntBASIC18.75■□□□□ 0.59
MBD3O95983 LINC01023-201ENST00000606054 436 ntBASIC18.75■□□□□ 0.59
MBD3O95983 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD3O95983 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MBD3O95983 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD3O95983 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3O95983 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3O95983 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
MBD3O95983 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
MBD3O95983 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.74■□□□□ 0.59
MBD3O95983 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 AC107918.2-201ENST00000530817 355 ntBASIC18.74■□□□□ 0.59
MBD3O95983 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 AC005412.3-201ENST00000580309 715 ntBASIC18.74■□□□□ 0.59
MBD3O95983 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
MBD3O95983 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3O95983 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 CICP13-201ENST00000422015 2789 ntBASIC18.74■□□□□ 0.59
MBD3O95983 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3O95983 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3O95983 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 CICP24-201ENST00000605464 2705 ntBASIC18.73■□□□□ 0.59
MBD3O95983 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3O95983 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD3O95983 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3O95983 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MBD3O95983 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms