Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 U82695.1-201ENST00000635752 1889 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 AL365203.3-201ENST00000609742 2057 ntBASIC17.09■□□□□ 0.33
TRUB2O95900 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
TRUB2O95900 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.09■□□□□ 0.33
TRUB2O95900 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.09■□□□□ 0.33
TRUB2O95900 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.09■□□□□ 0.33
TRUB2O95900 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.09■□□□□ 0.33
TRUB2O95900 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.09■□□□□ 0.33
TRUB2O95900 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRUB2O95900 AC009093.7-201ENST00000623853 1223 ntBASIC17.09■□□□□ 0.33
TRUB2O95900 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 AC022188.1-201ENST00000620960 1664 ntBASIC17.09■□□□□ 0.33
TRUB2O95900 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRUB2O95900 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRUB2O95900 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRUB2O95900 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TRUB2O95900 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRUB2O95900 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
TRUB2O95900 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRUB2O95900 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.08■□□□□ 0.33
TRUB2O95900 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRUB2O95900 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRUB2O95900 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRUB2O95900 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.08■□□□□ 0.32
TRUB2O95900 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.08■□□□□ 0.32
TRUB2O95900 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.08■□□□□ 0.32
TRUB2O95900 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.08■□□□□ 0.32
TRUB2O95900 SPTSSB-204ENST00000617024 1292 ntBASIC17.08■□□□□ 0.32
TRUB2O95900 AC008741.2-201ENST00000612792 3115 ntBASIC17.08■□□□□ 0.32
TRUB2O95900 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRUB2O95900 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.08■□□□□ 0.32
TRUB2O95900 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.08■□□□□ 0.32
TRUB2O95900 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.08■□□□□ 0.32
TRUB2O95900 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRUB2O95900 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRUB2O95900 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRUB2O95900 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.07■□□□□ 0.32
TRUB2O95900 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.07■□□□□ 0.32
TRUB2O95900 AC098859.1-201ENST00000502915 1238 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms