Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 UGT1A2P-201ENST00000454886 866 ntBASIC19.4■□□□□ 0.7
MBD4O95243 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.4■□□□□ 0.7
MBD4O95243 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.4■□□□□ 0.7
MBD4O95243 AC026979.3-201ENST00000607315 403 ntBASIC19.4■□□□□ 0.7
MBD4O95243 AL590560.3-201ENST00000623350 461 ntBASIC19.4■□□□□ 0.7
MBD4O95243 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
MBD4O95243 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MBD4O95243 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
MBD4O95243 AC006449.6-201ENST00000612330 2296 ntBASIC19.4■□□□□ 0.7
MBD4O95243 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MBD4O95243 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.39■□□□□ 0.7
MBD4O95243 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MBD4O95243 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MBD4O95243 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD4O95243 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
MBD4O95243 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD4O95243 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MBD4O95243 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD4O95243 INGX-202ENST00000489074 768 ntBASIC19.39■□□□□ 0.69
MBD4O95243 RNA5SP421-201ENST00000516864 134 ntBASIC19.39■□□□□ 0.69
MBD4O95243 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD4O95243 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD4O95243 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MBD4O95243 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD4O95243 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MBD4O95243 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD4O95243 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD4O95243 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD4O95243 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MBD4O95243 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.38■□□□□ 0.69
MBD4O95243 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MBD4O95243 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.38■□□□□ 0.69
MBD4O95243 AL139010.1-201ENST00000454878 894 ntBASIC19.38■□□□□ 0.69
MBD4O95243 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.38■□□□□ 0.69
MBD4O95243 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.38■□□□□ 0.69
MBD4O95243 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MBD4O95243 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD4O95243 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.38■□□□□ 0.69
MBD4O95243 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.38■□□□□ 0.69
MBD4O95243 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD4O95243 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD4O95243 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
MBD4O95243 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MBD4O95243 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MBD4O95243 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MBD4O95243 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD4O95243 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD4O95243 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MBD4O95243 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MBD4O95243 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD4O95243 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms