Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL5O76039 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.98■□□□□ 0.63
CDKL5O76039 ADH5P3-201ENST00000433842 1137 ntBASIC18.98■□□□□ 0.63
CDKL5O76039 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.98■□□□□ 0.63
CDKL5O76039 AL671883.3-201ENST00000603274 991 ntBASIC18.98■□□□□ 0.63
CDKL5O76039 AC008267.7-201ENST00000624570 1194 ntBASIC18.98■□□□□ 0.63
CDKL5O76039 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CDKL5O76039 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDKL5O76039 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL5O76039 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL5O76039 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 AL365203.3-201ENST00000609742 2057 ntBASIC18.97■□□□□ 0.63
CDKL5O76039 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL5O76039 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL5O76039 AC098859.1-201ENST00000502915 1238 ntBASIC18.97■□□□□ 0.63
CDKL5O76039 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL5O76039 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL5O76039 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL5O76039 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.97■□□□□ 0.63
CDKL5O76039 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL5O76039 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL5O76039 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL5O76039 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 NFIC-211ENST00000641145 8399 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDKL5O76039 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDKL5O76039 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.96■□□□□ 0.63
CDKL5O76039 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 SPDYE11-202ENST00000450699 704 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 AL138918.1-201ENST00000568306 659 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 SPDYE9P-201ENST00000570642 692 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.96■□□□□ 0.63
CDKL5O76039 AC026120.1-201ENST00000611536 926 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 SPDYE10P-202ENST00000612005 668 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 SPDYE8P-202ENST00000612377 668 ntBASIC18.96■□□□□ 0.63
CDKL5O76039 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms