Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ACTG1P14-201ENST00000446382 1122 ntBASIC20.13■□□□□ 0.81
SMARCA5O60264 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.13■□□□□ 0.81
SMARCA5O60264 MIR3687-2-201ENST00000577708 61 ntBASIC20.13■□□□□ 0.81
SMARCA5O60264 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 MIR3687-1-201ENST00000614492 61 ntBASIC20.13■□□□□ 0.81
SMARCA5O60264 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 AL365203.3-201ENST00000609742 2057 ntBASIC20.13■□□□□ 0.81
SMARCA5O60264 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMARCA5O60264 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.13■□□□□ 0.81
SMARCA5O60264 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.13■□□□□ 0.81
SMARCA5O60264 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 UXT-AS1-201ENST00000590504 1525 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCA5O60264 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SMARCA5O60264 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 MIR346-201ENST00000362234 95 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 AC105233.2-201ENST00000523697 349 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.12■□□□□ 0.81
SMARCA5O60264 AF228730.5-201ENST00000530288 346 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 SLC25A39P2-201ENST00000537614 270 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMARCA5O60264 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.12■□□□□ 0.81
SMARCA5O60264 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 SPTSSB-204ENST00000617024 1292 ntBASIC20.12■□□□□ 0.81
SMARCA5O60264 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SMARCA5O60264 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.12■□□□□ 0.81
SMARCA5O60264 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SMARCA5O60264 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.12■□□□□ 0.81
SMARCA5O60264 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMARCA5O60264 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 CDC14C-201ENST00000428251 1719 ntBASIC20.11■□□□□ 0.81
SMARCA5O60264 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.11■□□□□ 0.81
SMARCA5O60264 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.11■□□□□ 0.81
SMARCA5O60264 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 RN7SL589P-201ENST00000481268 310 ntBASIC20.11■□□□□ 0.81
SMARCA5O60264 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.11■□□□□ 0.81
SMARCA5O60264 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 AL513210.1-201ENST00000629608 234 ntBASIC20.11■□□□□ 0.81
SMARCA5O60264 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMARCA5O60264 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMARCA5O60264 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.11■□□□□ 0.81
SMARCA5O60264 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms