Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SSSCA1O60232 AK4P3-201ENST00000418260 669 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 AC096582.2-201ENST00000510860 516 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.38□□□□□ -0.27
SSSCA1O60232 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.38□□□□□ -0.27
SSSCA1O60232 MPDU1-223ENST00000582151 728 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 AC011498.5-201ENST00000592027 486 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.38□□□□□ -0.27
SSSCA1O60232 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.38□□□□□ -0.27
SSSCA1O60232 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.38□□□□□ -0.27
SSSCA1O60232 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SSSCA1O60232 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSSCA1O60232 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 AL590787.1-201ENST00000568856 1315 ntBASIC13.38□□□□□ -0.27
SSSCA1O60232 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSSCA1O60232 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.38□□□□□ -0.27
SSSCA1O60232 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 AC016027.1-202ENST00000607927 1699 ntBASIC13.37□□□□□ -0.27
SSSCA1O60232 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 INTS4P1-201ENST00000438455 1935 ntBASIC13.37□□□□□ -0.27
SSSCA1O60232 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SSSCA1O60232 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.37□□□□□ -0.27
SSSCA1O60232 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.37□□□□□ -0.27
SSSCA1O60232 MINOS1P3-201ENST00000457048 203 ntBASIC13.37□□□□□ -0.27
SSSCA1O60232 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.37□□□□□ -0.27
SSSCA1O60232 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.37□□□□□ -0.27
SSSCA1O60232 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.37□□□□□ -0.27
SSSCA1O60232 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 AP005901.3-202ENST00000581653 237 ntBASIC13.37□□□□□ -0.27
SSSCA1O60232 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.37□□□□□ -0.27
SSSCA1O60232 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSSCA1O60232 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.37□□□□□ -0.27
SSSCA1O60232 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.37□□□□□ -0.27
SSSCA1O60232 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSSCA1O60232 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms