Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.23■□□□□ 0.35
TNRC18O15417 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNRC18O15417 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.23■□□□□ 0.35
TNRC18O15417 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.23■□□□□ 0.35
TNRC18O15417 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 AL353637.1-201ENST00000451571 732 ntBASIC17.23■□□□□ 0.35
TNRC18O15417 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.23■□□□□ 0.35
TNRC18O15417 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC244157.2-201ENST00000616239 1006 ntBASIC17.23■□□□□ 0.35
TNRC18O15417 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNRC18O15417 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TNRC18O15417 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNRC18O15417 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TNRC18O15417 AC073150.1-201ENST00000450406 1084 ntBASIC17.22■□□□□ 0.35
TNRC18O15417 NDUFS6P1-201ENST00000485187 316 ntBASIC17.22■□□□□ 0.35
TNRC18O15417 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.22■□□□□ 0.35
TNRC18O15417 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TNRC18O15417 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TNRC18O15417 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.22■□□□□ 0.35
TNRC18O15417 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TNRC18O15417 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 COX20P1-201ENST00000366529 357 ntBASIC17.22■□□□□ 0.35
TNRC18O15417 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNRC18O15417 RN7SL396P-201ENST00000471086 295 ntBASIC17.22■□□□□ 0.35
TNRC18O15417 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.22■□□□□ 0.35
TNRC18O15417 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.22■□□□□ 0.35
TNRC18O15417 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.22■□□□□ 0.35
TNRC18O15417 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TNRC18O15417 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.22■□□□□ 0.35
TNRC18O15417 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.35
TNRC18O15417 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.21■□□□□ 0.35
TNRC18O15417 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.21■□□□□ 0.35
TNRC18O15417 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.21■□□□□ 0.35
TNRC18O15417 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.21■□□□□ 0.35
TNRC18O15417 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNRC18O15417 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.21■□□□□ 0.35
TNRC18O15417 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.21■□□□□ 0.35
TNRC18O15417 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.21■□□□□ 0.35
TNRC18O15417 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.21■□□□□ 0.35
TNRC18O15417 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.21■□□□□ 0.35
TNRC18O15417 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.21■□□□□ 0.35
TNRC18O15417 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNRC18O15417 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNRC18O15417 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms