Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 AP002469.2-201ENST00000531724 424 ntBASIC15.85■□□□□ 0.13
UBFD1O14562 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.85■□□□□ 0.13
UBFD1O14562 AL773604.1-201ENST00000617417 272 ntBASIC15.85■□□□□ 0.13
UBFD1O14562 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
UBFD1O14562 AC010507.1-201ENST00000633895 436 ntBASIC15.85■□□□□ 0.13
UBFD1O14562 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.85■□□□□ 0.13
UBFD1O14562 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.85■□□□□ 0.13
UBFD1O14562 AC092850.2-201ENST00000623821 2697 ntBASIC15.85■□□□□ 0.13
UBFD1O14562 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
UBFD1O14562 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.85■□□□□ 0.13
UBFD1O14562 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.85■□□□□ 0.13
UBFD1O14562 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBFD1O14562 AC023824.1-201ENST00000562945 2975 ntBASIC15.84■□□□□ 0.13
UBFD1O14562 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
UBFD1O14562 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
UBFD1O14562 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.84■□□□□ 0.13
UBFD1O14562 AL009183.1-201ENST00000603760 355 ntBASIC15.84■□□□□ 0.13
UBFD1O14562 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.84■□□□□ 0.13
UBFD1O14562 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
UBFD1O14562 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBFD1O14562 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
UBFD1O14562 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBFD1O14562 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBFD1O14562 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.83■□□□□ 0.13
UBFD1O14562 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
UBFD1O14562 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
UBFD1O14562 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.83■□□□□ 0.13
UBFD1O14562 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBFD1O14562 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.83■□□□□ 0.13
UBFD1O14562 AC136621.1-201ENST00000624017 2304 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.83■□□□□ 0.12
UBFD1O14562 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBFD1O14562 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 MRPL3P1-201ENST00000400109 1033 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 AC092474.2-201ENST00000424288 719 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 RHOQP3-201ENST00000437982 621 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBFD1O14562 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.83■□□□□ 0.12
UBFD1O14562 AC109635.5-201ENST00000533593 962 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.83■□□□□ 0.12
UBFD1O14562 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.83■□□□□ 0.12
UBFD1O14562 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.83■□□□□ 0.12
UBFD1O14562 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
UBFD1O14562 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBFD1O14562 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBFD1O14562 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms