Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIK3CDO00329 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIK3CDO00329 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIK3CDO00329 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIK3CDO00329 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PIK3CDO00329 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIK3CDO00329 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PIK3CDO00329 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.35■□□□□ 0.53
PIK3CDO00329 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.35■□□□□ 0.53
PIK3CDO00329 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PIK3CDO00329 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PIK3CDO00329 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.35■□□□□ 0.53
PIK3CDO00329 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 MIR648-201ENST00000385046 94 ntBASIC18.35■□□□□ 0.53
PIK3CDO00329 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.35■□□□□ 0.53
PIK3CDO00329 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PIK3CDO00329 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.35■□□□□ 0.53
PIK3CDO00329 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 LINC02084-201ENST00000606069 1096 ntBASIC18.35■□□□□ 0.53
PIK3CDO00329 AC008761.3-201ENST00000624803 892 ntBASIC18.35■□□□□ 0.53
PIK3CDO00329 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.35■□□□□ 0.53
PIK3CDO00329 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PIK3CDO00329 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PIK3CDO00329 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIK3CDO00329 BNIP3P1-202ENST00000550043 1585 ntBASIC18.34■□□□□ 0.53
PIK3CDO00329 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PIK3CDO00329 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.34■□□□□ 0.53
PIK3CDO00329 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.34■□□□□ 0.53
PIK3CDO00329 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.34■□□□□ 0.53
PIK3CDO00329 LINC02560-201ENST00000596379 459 ntBASIC18.34■□□□□ 0.53
PIK3CDO00329 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.34■□□□□ 0.53
PIK3CDO00329 AC009118.2-201ENST00000613275 655 ntBASIC18.34■□□□□ 0.53
PIK3CDO00329 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC004840.1-201ENST00000636359 365 ntBASIC18.34■□□□□ 0.53
PIK3CDO00329 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.34■□□□□ 0.53
PIK3CDO00329 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIK3CDO00329 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.34■□□□□ 0.53
PIK3CDO00329 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PIK3CDO00329 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.33■□□□□ 0.53
PIK3CDO00329 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIK3CDO00329 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PIK3CDO00329 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIK3CDO00329 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIK3CDO00329 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIK3CDO00329 KRT8P37-201ENST00000451609 1420 ntBASIC18.33■□□□□ 0.53
PIK3CDO00329 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PIK3CDO00329 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms