Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 KRT8P12-202ENST00000472924 1397 ntBASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SPDYE17-201ENST00000412399 783 ntBASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC004233.3-201ENST00000607794 1269 ntBASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AL592424.1-201ENST00000563624 1536 ntBASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 BTBD7P1-201ENST00000447253 1453 ntBASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AC245100.5-201ENST00000452108 331 ntBASIC16.27■□□□□ 0.2
C1QTNF3-AMACRE9PGA6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms