Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 RN7SL219P-201ENST00000582872 296 ntBASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 BRWD1P1-201ENST00000401091 371 ntBASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.3■□□□□ 0.52
LOC285556D6RIA3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 ENPP7P5-201ENST00000541031 1031 ntBASIC18.29■□□□□ 0.52
LOC285556D6RIA3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 AC243960.2-201ENST00000600996 747 ntBASIC18.29■□□□□ 0.52
LOC285556D6RIA3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LOC285556D6RIA3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 ME2P1-201ENST00000426028 1970 ntBASIC18.28■□□□□ 0.52
LOC285556D6RIA3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.28■□□□□ 0.52
LOC285556D6RIA3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 AC015910.1-201ENST00000579400 975 ntBASIC18.28■□□□□ 0.52
LOC285556D6RIA3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LOC285556D6RIA3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms